Messenger RNA in Plants

Messenger RNA in Plants

Have you ever thought about how plants know where, when, and how to grow? Research funded by the National Science Foundation found that plants have messages packaged into their RNA. They send messenger RNA (mRNA) from cell to cell to coordinate their growth. How do the mRNA molecules know where to go and how to get there? They have an escort to guide them.

This all looks pretty complicated, and it is. The escort for the mRNA is a protein called AtRRP44a. Without this escort to guide the messenger RNA between the cells, the cells can’t coordinate their growth, and the plant can’t develop properly. This cell-to-cell communication allows the plant to have all the information it needs to grow successfully in a changing environment.

Rigid walls surround plant cells, so how can the messenger RNA go from cell to cell? The mRNA, escorted by AtRRP44a proteins, can cross the barriers through tiny holes called plasmodesmata. The plasmodesmata are nanochannels that allow RNA and proteins, hormones, ions, and nutrients to pass from cell to cell.

Dr. David Jackson, who headed up this research at Cold Spring Harbor Laboratory in New York, says, “…plants are very sophisticated. We think of them just sitting in their environment, not moving, but they’re processing a lot of information. The different parts of the plants are talking to each other, sharing whether they have a pathogen attack or if they need some nutrients.”

Have you ever wondered how plants know when to shoot up in the spring, how to not shoot up in the fall, and how to handle infestations by insects and fungus? The creation of plants with this highly sophisticated communication system of messenger RNA and escort proteins is difficult to comprehend.

The more we understand of the creation, the more we see God’s wisdom and sophisticated handiwork. These design features are not accidents but the product of incredible intelligence and creativity.

— John N. Clayton © 2022

Reference: National Science Foundation and the journal Science.

Amazing Digestive System Design

Amazing Digestive System Design
The Human Digestive System

The Tufts University Health and Nutrition Letter for March 2022 has a great article titled “Your Amazing Digestive System.” It explains in great detail what happens to food from the time you look at it until it leaves the body. We take for granted what happens when we eat food, but the amazing digestive system is so complex that it is another extraordinary evidence of God’s wisdom and design. Consider the parts of the system as spelled out by the Tuft publication:

THE GASTROINTESTINAL TRACT: This tube runs from the mouth to the anus with a lining separating the food we eat from the inside of our body. Muscles and nerves control the speed of movement of the food, and nutrients are absorbed through the tube wall, which controls what nutrients are absorbed and how fast.

THE MOUTH: The smell and sight of food stimulate the secretion of saliva (which is why our mouths water), moistening and lubricating the food so we can swallow it. The saliva has an enzyme called salivary amylase, which begins to break down starches as the teeth grind the food into more digestible pieces.

THE ESOPHAGUS:
This tube is about a foot long and connects the throat to the stomach. It has muscles to push the food along and a valve that opens to let the food enter the stomach.

THE STOMACH: When food enters the stomach, gastric acid and digestive enzymes break down proteins and kill unwanted organisms. Stomach muscles contract and relax, reducing the food to a diluted paste.

THE SMALL INTESTINE: Most nutrients are absorbed here, including proteins, carbohydrates, fats, and micronutrients. This tube is about 20 feet long and an inch in diameter. The small intestine uses enzymes from the pancreas and bile from the gallbladder to break down the food. There are three sections to the small intestine, the duodenum, the jejunum, and the ileum, each absorbing different nutrients.

THE LARGE INTESTINE: Also called the colon, this muscular tube is three times wider than the small intestine but only about five feet long. The colon absorbs beneficial nutrients not previously absorbed. Anything the body can’t use is passed on to the rectum. The large intestine also absorbs water and has a complex organization of bacteria called “gut-microbiota.” Those microbes use fiber to produce beneficial compounds and produce many hormones required for our immune system.

Our amazing digestive system design defies any chance explanation. Each precisely designed part is an essential contributor to our ability to eat and digest food. It is no wonder that so many diseases can negatively affect the digestive system. It is hard to read all we know about this system and not be reminded of Psalms 139:14, “I will praise you, God, for I am fearfully and wonderfully made: marvelous are your works and that my soul knows very well.”

— John N. Clayton © 2022

Reference: Tufts Health and Nutrition Letter

Evidence of Life on Mars

Evidence of Life on Mars - There isn't any.
Selfy by Mars Curiosity Rover – NASA

The media has sensationalized the finding of organic molecules from Mars. For many people, hearing that something is “organic” means it is related to life. For example, in 1996, scientists reported on their study of a meteorite identified as ALH84001 found twelve years before in Antarctica. Characteristics of the meteorite indicated that it had come from Mars, and analysis showed that it contained organic compounds. Media reports immediately claimed that this was evidence of life on Mars at some time in the past.

Research on ALH84001 reported in January of 2022 shows the organic molecules probably came from the interaction of water and minerals and is not related to living organisms. Two chemical reactions known as serpentinization and carbonation can produce organic molecules when water and minerals react underground. Those reactions occur on Earth, and the researchers concluded that was most likely what formed the organic materials in ALH84001. Earlier researchers had made similar findings on a Martian meteorite named Tissint, which landed in Morocco in 2011.

Neither of these meteorites gives evidence of life on Mars. Organic molecules can form by abiotic (non-life) chemical reactions when water is present, along with the minerals that make up organic materials. Evidence shows that Mars is a place where abiotic chemistry has been very active, creating large amounts of organic compounds but no evidence of any form of life.

God is an incredible chemist. One reason many chemists are active believers in God is that they see the wisdom and creative design built into chemistry, making life possible. There is strong evidence that the laws of chemistry were fine-tuned for life, especially human life.

We may eventually find living things elsewhere in the solar system or other systems. However, finding organic compounds does not give evidence of life on Mars or anywhere else.

— John N. Clayton © 2022

References: “Organic molecules in an ancient Mars meteorite formed via geology, not alien life” in Science News (February 12, 2022, page 10) and Science VOL. 375, NO. 6577, January 13, 2022

Why Do Loons Migrate?

Why Do Loons Migrate?

It’s a bird that isn’t great at flying and is awkward at walking on land, but it’s very skilled at diving. The common loon (Gavia immer), also known as the great northern diver, is an aquatic bird that somewhat resembles a large duck or small goose. Since flying isn’t their strong point, why do loons migrate?

Most birds have hollow bones to reduce their weight for flying. The fact that a loon’s bones are not hollow adds weight to facilitate diving but makes flying more of a challenge. Loons can dive as deep as 200 feet (60 meters) and stay underwater for three minutes. Because of their dense bones, they sit lower in the water than ducks or geese when they swim. The loons’ legs, located near the rear of their bodies, facilitate quick diving but make walking more difficult.

Loons are well-designed for catching fish and well-suited for life in the ocean, where they spend their flightless winters. When spring comes, the loons molt, shedding their gray feathers and growing black ones. They gain stiff wing feathers and begin exercising to build strength for the migration journey. After a couple of months of preparation, they are ready to fly hundreds of miles north to freshwater lakes, where they spend the summer.

Why should loons leave the oceans where they have an abundant food supply? Just think that they wouldn’t have to go through the changes necessary to fly to the northern lakes. They could also avoid the dangers involved in making the migration. They wouldn’t need the complex navigation methods they use to return to the same lakes where they originated. Why do loons migrate? Why not do what many northerners do when they retire and just enjoy life along the warm and sunny ocean shores?

The answer seems to be more beneficial to other living creatures than to the loons. Their departure from the ocean relieves pressure on fish populations in coastal marine areas. More than that, it helps to control fish populations in northern freshwater lakes. Loons return to the north to benefit the northern ecosystems. These birds are well-designed to fill a niche in the ecosystem that other life forms can’t fully meet. 

So even though loons are not the best at flying and even less adapted for walking, they have what is needed to fill a niche in the ecosystem. Why do loons migrate? The loon’s migration may benefit other living creatures more than itself. How could natural selection explain this? According to the survival of the fittest, shouldn’t these birds survive and thrive doing their own thing rather than benefiting others? We don’t think natural selection fully explains the design of loons and their lifestyle. We suggest that the common loon is a testimony to the Creator’s wisdom of design in the life system we see all around us.

— Roland Earnst © 2022

No Life Without Water

No Life Without Water

Without water, life would not be possible. For that reason, astronomers are constantly looking for other locations in the universe where liquid water might exist. Only in such places could there be any hope of finding life. Whether life exists anywhere in the universe outside of planet Earth is a question people have asked for hundreds of years. Scientists still don’t know the answer, but everyone agrees that there could be no life without water.

The water molecule seems very simple. It is H2O–one oxygen atom combined with two hydrogen atoms. However, instead of bonding in a straight line (H-O-H), the two hydrogen atoms are on one side of the water molecule at a 104.5-degree angle from each other. That alignment gives the hydrogen side of the water molecule a partial positive charge, while the other side has a partial negative charge. Because of that, the positive and negative sides of water molecules attract one another and form hydrogen bonds resulting in a network of water molecules.

When water is in the gaseous state, the interaction between molecules is negligible. However, when it is in the solid form of ice, each water molecule forms a bond with four others, creating a lattice that causes ice to be lighter than liquid water. For most substances, the solid state is heavier than the liquid state. This unique property of water causes ice to float. Additionally, the low thermal conductivity of ice prevents the water below from freezing. If lakes and oceans froze from the bottom up, it would kill all marine life and ultimately all life on Earth.

If water molecules did not form hydrogen bonds, instead of boiling at 100 degrees C, water would boil at -100 degrees C. That would prevent life processes. Furthermore, because there is a 100 degree C difference between water’s melting and boiling points, life is possible in Earth’s wide range of environments. Water has the highest heat of evaporation of any known substance so that it remains liquid up to and even at its boiling point. It also has the second-highest heat capacity of any known substance, allowing its temperature to remain stable during heat fluctuations in the environment. Those qualities of water are also critical for life, meaning that there could be no life without water.

Water’s ability as a solvent makes it essential for the life processes of living cells. Likewise, water’s inability to dissolve oily substances is vital to create a strong “hydophobic effect.” Cell membranes, DNA, RNA, and proteins all contain oil-like regions. If the water in the cells could dissolve them, life would not be possible. In addition, the water molecule can participate in and enable chemical processes such as hydrolysis, reduction, oxidation, and others that are essential in living cells.

The bottom line is that there is no life without water and the fine-tuning of the hydrogen bonding in water molecules. With new scientific discoveries, we see fine-tuning for life in the cosmos and even in the cells of our bodies. Without that fine-tuning, life would not exist, and we would not be here. Accidental coincidences do not explain such incredible precision of design. We think the explanation goes beyond science and points to an intelligent Designer.

— Roland Earnst © 2022

For much more on this, read chapter three, “The Chemical Anthropic Principle,” in Fazale Rana’s book Fit for a Purpose.

Teachings of Mohammad and Jesus Christ

Teachings of Mohammad and Jesus Christ - Bible and Quran

One of the ongoing struggles in the world today is the conflict between the followers of Mohammad and the followers of Jesus Christ. When science forced me to realize there is a God, I had no compelling reason to believe that the God who created time, space, and matter/energy was the God of the Bible. Looking for answers, I examined the teachings of Mohammad and Jesus Christ.

I got a copy of the Koran translated into English by N. J. Dawood, a Muslim, and published by Penguin classics. My Muslim friends have told me that no English translation is valid, but recent events in Pakistan have shown that my reading was the same as the mobs in Pakistan.

In addition to some scientific errors, the Koran has teachings that denigrate women. (See Women 4:34 and the Confederate Tribes 33:51-52.) It also commands violence. For example, The Spoils 8:37-41 commands Muslims to “make war on the Christians and Jews.” In Repentance 9:4-7, 9:14, and 9:122-125, Mohammad says to “make war on the Christians and Jews who dwell among you.” Let me hasten to say that my Muslim acquaintances are as disturbed as I am with these teachings and would never participate in them. The problem is with the teachings of Mohammad, not what all Muslims do.

However, recent events in Pakistan have shown that Muslims in that part of the world follow those teachings of Mohammad. On February 14, 2022, the Associated Press reported that a mob stoned a man named Mushtaq Ahmed, whom the accused of burning a Koran. When police tried to intervene, they were stoned and injured, and Amed was killed.

In a separate incident, a couple with four children in Punjab, Pakistan, were accused of sending written text messages criticizing Mohammad. Neither of them can read or write, but the mob tortured the husband and threatened his wife with sexual assault. They put the couple in prison for seven years and gave their four children to relatives.

As a man convinced that God exists, I could not embrace a book that taught things I knew were destructive and untrue. When I read the teachings of Jesus Christ, I saw a plea for peace, love, and non-violence. He elevated women and refused to return evil for evil. I saw the striking contrast between the teachings of Mohammad and Jesus Christ.

If you have doubts about the teachings of Christ and Mohammad, I would encourage you to get a copy of the Koran and read all of it. Then read Matthew through at least chapter seven. Compare the teachings of Mohammad and Jesus Christ. I am thankful that most Muslims I know do not accept Mohammad’s call for violence, his embracing of polygamy, or the abuse of women. Although there are many good things in the Koran, it also calls for a cultural dependence on violence and servitude. It fails to deal with what can change the world and make it a better place.

We have a chart listing difficult passages in the Koran, which you can read or download HERE.

— John N. Clayton © 2022

Reference: Associated Press for 2/14/22 reported in the South Bend Tribune, page 8 A.

The Contrast Between Forests and Cities

The Contrast Between Forests and Cities - Amazon Rainforest
Amazon Rainforest

Genesis 1:11-12 describes Earth having three kinds of plants which most versions translate as grass (“deshe” in Hebrew), herbs (“eseb” in Hebrew, meaning a non-woody plant with seasonal foliage such as most vegetables), and fruit trees (“ets” bearing fruit “peri” in Hebrew). Genesis 2:9 tells us that “the Lord God made every tree that is pleasant to the sight, and good for food.” The first mention of cities in the Bible is in Genesis 11:1-9 with the Tower of Babel. Then in Genesis 13:12, Lot chooses to live “in the cities of the plain,” Sodom and Gomorrah. The Bible shows a contrast between forests and cities.

The habitat of early humans described in the first chapters of Genesis is very different from the cement-paved cities filled with massive structures that we see in the western world today. The construction of cement jungles has brought on an enormous number of social problems as well as pandemics and nutritional issues. As we see the contrast between forests and cities, we are slowly beginning to understand that God’s original design works best.

Archaeologists have a new airborne laser research tool called LIDAR (Light Detection and Ranging). It enables them to see through the canopy of vegetation, and they are discovering ancient cities hidden by the rainforests. Researchers are finding causeways, hydrological networks, massive structures, and elaborate ceremonial centers. They are seeing the remains of the Maya in South America, the Angkor in Cambodia, and an area called Kuk Swamp in New Guinea.

In these ancient cities, palm trees, Brazil nuts, sugar cane, bananas, and many tropical fruits were harvested from trees that surrounded dwellings. In addition, people grew small patches of maize and millet between the trees. Today, we are beginning to insert green spaces into our cities, and new varieties of plant products are showing up in our grocery stores.

Archaeologists have found evidence of millions of people living in cities in the Amazon basin, Africa, and Asia. The first attempt at farming in Britain was some 6,000 years ago, but in the Fertile Crescent, farming dates back to 11,000 years ago. The Fertile Crescent is the biblical location of the Garden of Eden, which brings us back to God’s original plan for human habitation.

A failure to properly use all the resources God has given us has brought pain, disease, and hunger throughout history. As we see the contrast between forests and cities, we come to appreciate the blessing of the resources God originally created.

— John N. Clayton © 2022

Reference: “Rethinking the Jungle” by Matthew Symonds in Current World Archaeology Magazine (#110) for December 2021/January 2022. Symonds shows that the jungle can support massive human populations without all the ills of modern agriculture and city dwelling. His approach is evolutionary, and much of the article comes from a new book by Patrick Roberts titled Jungle: How Tropical Forests Shaped the World – and Us (Viking/Penguin 2021, ISBN – 978-0241472743).

Changing Climate and the Human Response

Changing Climate and the Human Response

There is no question that we are experiencing a rapidly changing climate. The data is massive and comes from many places on Earth. There hasn’t been much of a change here in Michigan so far. We have had a very typical winter at the time of this writing. However, in places like Alaska, the changes have been very pronounced. Many areas around the globe have witnessed changes not seen before in modern times.

We must understand that there have been many periods of changing climate throughout Earth’s history. At one time, glaciers covered a significant part of North America, giving undeniable evidence of a frigid climate. Around 12,000 years ago, there was a cold period scientists call the “Younger Dryas.” Many large animals went extinct during that climate change. When dinosaurs roamed the Earth, the climate was very different from today. Not only was it warmer, but the oxygen level was higher.

The point is that changing climate is not new. Our planet is a dynamic place, and climate change is part of its history. The issue is how much humans contribute to climate change and whether it will have disastrous consequences for us. As the planet warms, the thawing of glaciers and polar ice releases water into the ocean. This means we have to prepare for weather changes and a rise in sea level.

Some people will use the changes to deny God’s existence. Others will blame God or claim that He is using climate change as a weapon to afflict us for rejecting HIm. Instead, we suggest that God has allowed us to understand how the creation works and expects us to use that knowledge to prepare for the future.

Perhaps as humans battle with the changing climate, it will prevent the nonsense of humans battling other humans. God won’t force solutions on us, but He has given us the tools we need to live successfully on this planet.

— John N. Clayton © 2022

The Age of Methuselah in the Bible

What Was the Age of Methuselah?

A frequent challenge from atheists concerns the lifespan of early Bible characters. Genesis 5 contains the “generations of Adam” up to the time of Noah. It lists Methuselah as having lived 969 years. This chapter raises many questions, and atheists have ridiculed the idea that people ever lived that long. Anthropologists have methods for determining how old a person was when they died, and no data shows people ever living hundreds of years as we measure years today. Then what was the age of Methuselah?

It is essential to understand that this is not just a biblical peculiarity. Other ancient cultures have records of people living a very long time. The ancient Sumerian King List said that King Alulim ruled for 28,800 years, and others longer than that! However, the all-time longevity champ is a spiritual teacher in Jainism named Shreyansanatha, who was recorded to have lived 8,400,000 years. The message should be clear to us that none of these are our familiar calendar years as established by Pope Gregory XIII in 1582.

There have been studies to determine how ancient people expressed time. The Hebrews used lunar cycles for reckoning time, but they have modified that because certain numbers had special significance. For example, seven indicated completeness, and six was just short of completeness. The Book of Revelation contains symbolic numbers that people have often erroneously misinterpreted.

A careful study of this subject will show that the intent of Genesis 5 is not to establish time or the chronological ages. Applying modern calendar concepts to Genesis would mean that Methuselah was killed by the flood of Noah. The message of the passage is not the age of Methuselah, but that he was a descendent of Enoch and an ancestor of Noah.

When you read any book of any culture, you have to look at who wrote it and to whom and why, and how the people it was written to would have understood it. That is especially true when considering the ages of ancient personalities.

— John N. Clayton © 2022

Color Vision Differences in Various Creatures

Color Vision Differences in Various Creatures - Jumping Spider
Saitis barbipes

Color vision differences in various creatures result from eye design. Humans see color because we have three kinds of cones in the retina that respond to different energies of light. Our eyes have color cones sensitive to red, green, and blue. If light stimulates all three types of cones, we see it as white. When light stimulates red and green cones but not blue, we see yellow. Other combinations result in every color we can see.

Some light energies do not trigger any of our cones, yet they affect us. For example, our eyes don’t perceive ultraviolet energy, but UV rays can cause sunburn. Likewise, we can’t see infrared energy, but we can feel it as heat.

Animals have many color vision differences compared to humans. Why do deer not see the orange jackets that hunters frequently wear? A deer can’t see very much color at all. That means a hunter standing still in the woods wearing an orange camouflage outfit will be invisible to a deer but highly visible to other hunters.

Some animals that do not see color can see light energies that we can’t. For example, a rattlesnake can see infrared, which is a lower energy than the visible light we see. A warm-blooded animal such as a rat or mouse gives off infrared radiation. A rattlesnake can see the infrared light coming from the rat on a very dark night when there is no light visible to humans.

The National Science Foundation reported on a jumping spider (Saitis barbipes) found in Europe and North Africa with no red color sensitivity. A red ball would appear gray or black to those spiders. However, the males of these furry spiders have a bright red crown and legs. Even though potential mates cannot see the red, certain areas of the spider’s body strongly absorb ultraviolet light. Those areas appear as “spider green” to other jumping spiders.

In addition to color vision differences, some animals have specialized vision tools to help them survive. For example, a marine turtle’s eyes have polarized corneas. That polarization allows the turtle to see reflected light because it is polarized parallel to the reflecting surface. A turtle needing to locate water will simply scan the horizon to see polarized light reflected from the water’s surface. Other animals, such as birds or fish, have polaroids in a vertical orientation, enabling them to see through clouds or water without having to deal with glare.

Designing cells that can detect light is only part of the story. Making eyes that meet the peculiar needs of various animals is much more difficult. Your vision is just one more support for David’s statement, “I will praise you, Lord, for I am fearfully and wonderfully made.” (Psalms 139:14.)

— John N. Clayton © 2022

Reference: The National Science Foundation and the journal The Science of Nature